Browse of TCMCG068C48870 protein

CDS

Accession Number	TCMCG068C48870
gbkey	CDS
Protein Id	KAG5616741.1
Location	join(40206080..40206387,40206484..40206630,40207180..40207333,40208326..40208458,40211508..40211653,40213209..40213304,40213405..40213457,40215325..40215456,40215761..40215812,40215930..40216049,40216618..40216752,40220805..40220933,40232414..40232554,40232701..40232795,40237299..40237495,40238437..40239227,40239518..40239598,40239679..40239744,40244427..40244504,40244833..40245042,40245807..40245938,40246032..40246208,40247178..40247357,40248681..40249066,40253368..40253482)
Organism	Solanum commersonii
locus_tag	H5410_016565

Protein

Length	1417aa
Molecule type	protein
Topology	linear
Data_file_division	PLN
dblink	BioProject:PRJNA655804, BioSample:SAMN15755581
db_source	JACXVP010000003.1
Definition	hypothetical protein H5410_016565 [Solanum commersonii]
Locus_tag	H5410_016565

EGGNOG-MAPPER Annotation

COG_category	A
Description	Cleavage and polyadenylation specificity factor
KEGG_TC	-
KEGG_Module	-
KEGG_Reaction	-
KEGG_rclass	-
BRITE	ko00000        [VIEW IN KEGG] ko00001        [VIEW IN KEGG] ko03019        [VIEW IN KEGG] ko03021        [VIEW IN KEGG]
KEGG_ko	ko:K14401        [VIEW IN KEGG]
EC	-
KEGG_Pathway	ko03015        [VIEW IN KEGG] map03015        [VIEW IN KEGG]
GOs	GO:0003674        [VIEW IN EMBL-EBI] GO:0003676        [VIEW IN EMBL-EBI] GO:0003723        [VIEW IN EMBL-EBI] GO:0003729        [VIEW IN EMBL-EBI] GO:0005488        [VIEW IN EMBL-EBI] GO:0005575        [VIEW IN EMBL-EBI] GO:0005622        [VIEW IN EMBL-EBI] GO:0005623        [VIEW IN EMBL-EBI] GO:0005634        [VIEW IN EMBL-EBI] GO:0005737        [VIEW IN EMBL-EBI] GO:0005829        [VIEW IN EMBL-EBI] GO:0006139        [VIEW IN EMBL-EBI] GO:0006378        [VIEW IN EMBL-EBI] GO:0006379        [VIEW IN EMBL-EBI] GO:0006396        [VIEW IN EMBL-EBI] GO:0006397        [VIEW IN EMBL-EBI] GO:0006725        [VIEW IN EMBL-EBI] GO:0006807        [VIEW IN EMBL-EBI] GO:0008150        [VIEW IN EMBL-EBI] GO:0008152        [VIEW IN EMBL-EBI] GO:0009987        [VIEW IN EMBL-EBI] GO:0010467        [VIEW IN EMBL-EBI] GO:0016070        [VIEW IN EMBL-EBI] GO:0016071        [VIEW IN EMBL-EBI] GO:0031123        [VIEW IN EMBL-EBI] GO:0031124        [VIEW IN EMBL-EBI] GO:0034641        [VIEW IN EMBL-EBI] GO:0043170        [VIEW IN EMBL-EBI] GO:0043226        [VIEW IN EMBL-EBI] GO:0043227        [VIEW IN EMBL-EBI] GO:0043229        [VIEW IN EMBL-EBI] GO:0043231        [VIEW IN EMBL-EBI] GO:0043631        [VIEW IN EMBL-EBI] GO:0044237        [VIEW IN EMBL-EBI] GO:0044238        [VIEW IN EMBL-EBI] GO:0044424        [VIEW IN EMBL-EBI] GO:0044444        [VIEW IN EMBL-EBI] GO:0044464        [VIEW IN EMBL-EBI] GO:0046483        [VIEW IN EMBL-EBI] GO:0071704        [VIEW IN EMBL-EBI] GO:0090304        [VIEW IN EMBL-EBI] GO:0090305        [VIEW IN EMBL-EBI] GO:0090501        [VIEW IN EMBL-EBI] GO:0097159        [VIEW IN EMBL-EBI] GO:1901360        [VIEW IN EMBL-EBI] GO:1901363        [VIEW IN EMBL-EBI]

Sequence

CDS:   ATGAGTTTCGCGGCGTGTAAGACAATGCATTGCCCCACCGGCATCGAGAATTGCGCCTCCGGCTTTATCACTCACTCAGCCGCCGAAATCACCCCGCAAATTCAGACAGCCGACGTCGACTCCGATTGGCCAGCCACCAAGCCAGTCGGCCCCATGCCGAACCTTGTTGTTTCAGCTGGAAATGTGCTTGAAATTTACTTGATTAGGGTTGAACAAGCATCATCCAGGGATGCCGCCGAAGTAGTGAAACGTGGTGGCCTTATGGCCGGTATTTCTGCTTCTTCACTTGAGCTCGTTTGCACTTATAGGTTACATGGAAATATATATTCAATGGGTGTGATAACAGCAGGAGGAGCTGATGGTGGGAAAAGGAGGGATTCAATTATCTTATCTTTTGAAGATGCTAAAATGTCCGTTCTTGAGTTTGATGATGCCACTCATGGGCTTCGGACCAGCTCAATGCACTTTTTCGAAGGCCCAAACTGGTTTCATTTAAAAAGAGGACGAGAGTCATTTGACAAAGGTCCTATTATCAAGGTTGATCCGCAGGGGAGATGTGCTGGTGTCTTTGCTTTCGAACAGCAGATGATAGTCCTCAAGGCTGCTGAGGTCAACTCTAGCTTAGCTGGTGAGGACAGTGCTTTTGGTGCTGGAGGTGCCTCAGCTCGCATTGAATCATCATATATCATCACGTTACGAGATCTTGATGTGAGGCATGTCAAGGATTTCACATTTCTTCATGGTTATATTGAGCCTGTCATGGTTATCCTTCATGAACGGGAACTCACTTGGTCTGGGCGCGTCTCTTGGAAACACCATACTTGTATGGTCTCTGCCTTTAGTATTAGTACAACGTTGAAGCAGCATCCACTGATATGGTCAGCCGCTAATCTCCCTCATGATGCATATAAACTTCTTGCTGTGCCATCTCCTATTGGTGGAGTCCTTGTAATTGGTGCAAACACTATCCATTATCATAGCCAGTCATCTTCTTGTTCGTTGGCGTTGAACAATTTTGCTTTTTTTGGTGATAACAGTCAAGAAATGCCAAGATCATCTTTTAATGTGGAGTTAGATGCAGCTAATGCAACTTGGTTAACAAGTGATGTGGCAATGCTGTCGACAAAAACAGGCGAACTACTTCTTCTAACGATTATATATGATGGGAGAATTGTCCAAAAGCTCGACCTTTCAAAATCAAGAGCTTCAGTACTTACATCGGGAATTACAACAATTGGAGACTCATTTTTCTTTTTGGGCAGTCGCCTTGGTGATAGTTTGCTCGTGCAATTTTCTTGTGGTCTTGGAGGGTCAAATTTGCCTCCTGGGGTGCAGGAAGAGGTTGGAGATATTGAAAGTGATGCTCCTTCTGCAAAGAGGCTAAGAATGTCATCCTCGGATGCATTGCAAGACATGATTAATGGTGAAGAGCTTTCCTTGTATGGTACAGCTCCAAATAATGCACAATCAGCACAGAAGACATTCTCATTTGCAGTGAGGGATTCCCTGATCAATGTTGGCCCTCTAAAAGACTTTTCGTATGGTATGAGAATTAATGCTGACCTGAATGCTACTGGAATTGCCAAGCAAAGTAATTATGAACTGGAAGCTTTACCAGGTTGCAAGGGAATTTGGACTGTCTACCACAAGAATACACGTATCCATCTCAGCGAATCCTCAAGGATGGCAGATGAAGAAGATGAATATCATGCATATTTGATTATTAGTTTGGAGGCTCGTACAATGGTTCTGCAGACTGCAAATAATTTGGAGGAGGTAACAGAGAATGTCGATTACTATGTTCAAGGAACTACTCTTGCTGCTGGAAATTTATTTGGGAGACGCCGAGTTATCCAAGTGTTTGCTCGTGGTGCTCGAATTCTTGATGGTGCATTTATGACTCAAGAATTGAGTTTTAAGGCTTCAAATGTGGAATCTGGCTCAAGTTCAGATACTTCTATCGTAGCTTCTGTTTCAATAGCGGATCCTTATGTTCTACTAAGAATGACAAATGGAAGTCTTCAGCTTCTTGTTGGAGATCCATCATCATGCTCTGTTTCTCTTACTGTTCCATCAGTATTTGAAAGCTCAAAAAAGTCAATATCTGCTTGTACACTATACCATGATAAAGGTCCTGAACCTTGGCTCAGGAAGACTAGTACTGACGCTTGGCTTTCTTCTGGCATGGGGGAGGCAATTGATGGTGCCGATGGGGTAACCCAGGATCAGGGTGATGTATATTGTGTTGTTTGTTATGAAAATGGCACTCTTGAAATATTTGATGTTCCCAATTTTACTTGTGTTTTCTCTGTTGATAAATTCATTTCTGGGAGGACCTACCTTGTTGACACCTTTATGCAAGACTCGGTCAATGGTCTTCATGCACATTCAAAGAATACCGAGGAAGTAATCCGACCTGGACAGAAAGAGAATAGTAAGGACGTGAAGATAAACGTGGTGGAGTTGATGATGCATAGATGGATAGGGAAACATTCCCGCCCTTTTCTTTTTGGGATATTGGCTGATGGGACGATTCTATGTTACCATGCATATGTTTTTGAAGGTTCAGAGAATTCTTCTAAAGTTGAGGGATCTGTTTCATCACAGAATTCCATTAGTCTTAGTAGTACAAATGCATCTAGGCTCAGAAATTTAAGATTTGTTCGGGTTCCAGTAGACAATTATGCAAGGGAAGAGATGCCATCTGGAACCCAATTACAGCGAATGAATGTTTATAAGAATATTGGTGGTTCTCAAGGAATATTTCTCACCGGATCAAGGCCATCTTGGTTCATGGTGTTTCGTGAACGACTTAGAATACATCCACAGCTGTGTGATGGACCTATTGTTGCCTTCACTGTCCTTCACAATGTTAACTGTAATCACGGACTTATATATGTTACGGCCCTGGGAACTTTAAAGATTTGCCAACTTCCATCTTTCCTGTCCTATGACAATTATTGGCCAGTGCAAAAGATACCACTAAAGGGAACACCACATCAAGTTGCTTATTTTGCTGAGAAGAATGTTTACTCAGTTATAGTTTCAGTTCCAGTTCTTAAGCCATTGAATCAAGTCCTATCAACTATAGCTGATCAAGAGGTTGGTCAGCAGTTTGATCCTGATAATTTAAATTATGAAGGAAGCTATCCTATAGAAGAATTTGAGGTGCGGATTGTGGAACCGGAAAAATCTGGTGGGCCCTGGAAAACAAGGGCAAGTATTCCTATGCAAAGTTCTGAAAATGCTCTAACTGTGAGGATGAATACAACAACGAGAGAGAATGAAACACTTTTGGCAGTTGGAACTGCTTACGTGCAAGGGGAGGATGTGGCTGCAAGGGGGCGTGTGCTTTTGTTTTCTATAGATCGCACTGCTGATAATTCACGAACATTGGTATCAGAAGTCTACTCAAAGGAATTAAAGGGTGCTATACCTGCTTTAGCTTCACTTCAAGGTCACTTGTTGATAGCTTCTGGTCCTAAAATTATCTTGCATAAATGGACGGGTTCTGAATTGAATGGAGTTGCCTTTTGTGATTATCCTCCACTTCATGCTGTGAGCCTAAATATTGTGAAGAACTTTATTCTTCTTGGAGACATTCACAAGAGTATATCCTTCGTCAGTTGGAAAGAGCCTCAACTGAGTTTATTGGCTAAAGATTTTAGTCCGCTTGATTGTTTAGCAACAGAGTTTTTGATTGATGGTAGCACTCTCAGTCTTGTAGTTTCAGATGATCAAAAGAATGTTCAGATATTCTACTATGCTCCAAAGGTGTCAGAAAGTTGGAAAGGGCAGAAGCTTCTGTCTAGGGCTGAGTTCCATGTTGGTTCTCGCATTACAAAGTTTTTACGCTTGCAGTTGCTTCCCACTACATCTGAACGTACTGCTACCACTCCTGGTTCTGATAAAACTAATCGCTTCGCTACAGTGTTTGGCACTTTAGAAGGTAGCCTTGGCTGTATAGCCCCTCTGGATGAACTTACTTTTCGTAGGCTTCAGTCCCTGCAGAAAAAGCTTGTCACTGCTGTTACCCATGTTGCTGGATTAAATCCAAGATCTTTCCGCCAGTTCCGTTCAAATGGAAAAGCTCATCGGCCTGGTCCAGACAACATAGTTGACTGTGAGCTGCTATCCCACTATGAGATGCTCCCATTGGAGGAACAGCTTGAGATAGCTCAGCAGATCGGAACCACTCGGATGCAAATAATGTCAAACTTGAATGACATGATCTTGGGTACAAGTTTCTTATAA

Protein:   MSFAACKTMHCPTGIENCASGFITHSAAEITPQIQTADVDSDWPATKPVGPMPNLVVSAGNVLEIYLIRVEQASSRDAAEVVKRGGLMAGISASSLELVCTYRLHGNIYSMGVITAGGADGGKRRDSIILSFEDAKMSVLEFDDATHGLRTSSMHFFEGPNWFHLKRGRESFDKGPIIKVDPQGRCAGVFAFEQQMIVLKAAEVNSSLAGEDSAFGAGGASARIESSYIITLRDLDVRHVKDFTFLHGYIEPVMVILHERELTWSGRVSWKHHTCMVSAFSISTTLKQHPLIWSAANLPHDAYKLLAVPSPIGGVLVIGANTIHYHSQSSSCSLALNNFAFFGDNSQEMPRSSFNVELDAANATWLTSDVAMLSTKTGELLLLTIIYDGRIVQKLDLSKSRASVLTSGITTIGDSFFFLGSRLGDSLLVQFSCGLGGSNLPPGVQEEVGDIESDAPSAKRLRMSSSDALQDMINGEELSLYGTAPNNAQSAQKTFSFAVRDSLINVGPLKDFSYGMRINADLNATGIAKQSNYELEALPGCKGIWTVYHKNTRIHLSESSRMADEEDEYHAYLIISLEARTMVLQTANNLEEVTENVDYYVQGTTLAAGNLFGRRRVIQVFARGARILDGAFMTQELSFKASNVESGSSSDTSIVASVSIADPYVLLRMTNGSLQLLVGDPSSCSVSLTVPSVFESSKKSISACTLYHDKGPEPWLRKTSTDAWLSSGMGEAIDGADGVTQDQGDVYCVVCYENGTLEIFDVPNFTCVFSVDKFISGRTYLVDTFMQDSVNGLHAHSKNTEEVIRPGQKENSKDVKINVVELMMHRWIGKHSRPFLFGILADGTILCYHAYVFEGSENSSKVEGSVSSQNSISLSSTNASRLRNLRFVRVPVDNYAREEMPSGTQLQRMNVYKNIGGSQGIFLTGSRPSWFMVFRERLRIHPQLCDGPIVAFTVLHNVNCNHGLIYVTALGTLKICQLPSFLSYDNYWPVQKIPLKGTPHQVAYFAEKNVYSVIVSVPVLKPLNQVLSTIADQEVGQQFDPDNLNYEGSYPIEEFEVRIVEPEKSGGPWKTRASIPMQSSENALTVRMNTTTRENETLLAVGTAYVQGEDVAARGRVLLFSIDRTADNSRTLVSEVYSKELKGAIPALASLQGHLLIASGPKIILHKWTGSELNGVAFCDYPPLHAVSLNIVKNFILLGDIHKSISFVSWKEPQLSLLAKDFSPLDCLATEFLIDGSTLSLVVSDDQKNVQIFYYAPKVSESWKGQKLLSRAEFHVGSRITKFLRLQLLPTTSERTATTPGSDKTNRFATVFGTLEGSLGCIAPLDELTFRRLQSLQKKLVTAVTHVAGLNPRSFRQFRSNGKAHRPGPDNIVDCELLSHYEMLPLEEQLEIAQQIGTTRMQIMSNLNDMILGTSFL